SISY multiple

SISY mutiple set contains almost everything from the SISYPHUS database.

  • We removed proteins, which are no longer available in the PDB.
  • SISYPHUS occasionally use the same protein chain multiple times within an alignment family, e.g. in case of domain duplications. This would result in a large number of alternative reference alignments. In that case we exclude those particular proteins.
    •

    Alignment families with less than three members left after applying the rules above. Note that the reference alignments are consensus (core) alignment indicating what is equivalent in all family members. The table can be sorted alphabetically or numerically by a mouse click in the column header.

    SisyAlId Mem. Category Caveats Eqr Class
    -> AL00050464 13 fold aL 48
    -> AL00050465 9 homologous aL 61
    -> AL10053335 60 fragment aL 22
    -> AL10051350 83 fragment aL 28
    -> AL00048098 16 homologous aL, mC 88
    -> AL00063492 6 homologous 71
    -> AL00051392 3 homologous aL 168
    -> AL00053335 10 homologous aL 71
    -> AL00051395 28 homologous aL 118 C
    -> AL00101215 3 homologous aL 68
    -> AL00051913 15 homologous aL 100
    -> AL00063410 4 homologous 59 C
    -> AL00057282 4 homologous 30
    -> AL00050475 11 homologous aL, mC 76
    -> AL00054790 6 homologous 57
    -> AL00089623 3 homologous aL 143
    -> AL00051735 7 homologous aL, mC 78 I, P, C
    -> AL00069394 6 homologous aL 197
    -> AL00064294 4 homologous 137
    -> AL00052113 3 homologous 45
    -> AL00054407 7 homologous aL, iC, mC 70
    -> AL00088696 11 fold 40 I
    -> AL00054097 6 homologous aL 68
    -> AL00049879 16 homologous aL, mC 47 I
    -> AL00054253 5 homologous aL, mC 80
    -> AL00109622 3 homologous mC 115
    -> AL10063562 4 fragment 33
    -> AL00052086 7 fold aL 83 C
    -> AL00050684 23 fold aL 39 I
    -> AL00050685 4 homologous aL 69
    -> AL10054593 22 homologous aL, mC 152 P, C
    -> AL10074933 5 homologous 69
    -> AL20089447 3 homologous mC 73
    -> AL00052821 4 homologous aL 66
    -> AL00051934 7 homologous aL 205
    -> AL00051931 3 homologous aL 285
    -> AL10051735 109 fragment aL, iC 27
    -> AL00053697 4 homologous aL 64 C
    -> AL00053354 5 homologous aL 168
    -> AL00056276 3 homologous aL, mC 162
    -> AL10050021 6 fold aL 22 P
    -> AL00055594 7 homologous aL, mC 80
    -> AL00069572 6 homologous 176
    -> AL00055593 7 fold aL 66
    -> AL00047241 30 homologous aL 106 C
    -> AL00049599 4 homologous 86
    -> AL00050692 18 homologous aL, mC 51
    -> AL00057468 13 homologous iC 36 C
    -> AL00051713 3 homologous aL 298
    -> AL00051412 10 homologous aL 242
    -> AL00054403 8 homologous aL, iC, mC 55
    -> AL10063763 7 fold 29
    -> AL00055186 3 homologous 125
    -> AL00055464 7 homologous aL 51 P
    -> AL10050335 6 homologous aL 81
    -> AL00050815 29 homologous aL, mC 79 C
    -> AL00100877 11 homologous aL, iC 69 P
    -> AL00052799 18 homologous aL 67 C
    -> AL00102031 3 homologous 71
    -> AL00051352 18 homologous aL 193
    -> AL10053473 119 fragment aL, iC 26 C
    -> AL10063410 8 homologous 77 P, C
    -> AL00053701 5 homologous 372
    -> AL00050876 4 homologous aL 105
    -> AL00069117 4 fragment 53
    -> AL00057413 3 homologous 61
    -> AL00053473 13 homologous aL, iC 90 I
    -> AL00053614 7 homologous aL 213
    -> AL00053377 3 homologous aL 186
    -> AL00052317 25 homologous aL 63 P
    -> AL00055723 3 homologous aL, mC 109
    -> AL10050412 6 fragment aL 23 C
    -> AL10051306 4 fold 36 I
    -> AL00047305 9 homologous aL, mC 81 C
    -> AL00050847 28 homologous aL 114
    -> AL00052787 6 homologous 83
    -> AL00050155 46 homologous aL 63
    -> AL00047861 6 homologous aL, iC 56 P, C
    -> AL00088995 4 homologous 38
    -> AL10050815 29 homologous aL 44
    -> AL00055637 3 homologous mC 60
    -> AL00052150 3 homologous 134 C
    -> AL00056022 3 homologous 119
    -> AL10050155 51 homologous aL 60 P
    -> AL00074653 3 homologous aL, mC 48
    -> AL00051984 3 homologous aL 79
    -> AL10052799 34 fragment aL 25
    -> AL10089447 23 fragment aL 20
    -> AL10050464 4 homologous aL 46 C
    -> AL00052141 8 homologous aL 88
    -> AL10054814 8 fragment 22 C
    -> AL00051366 25 homologous aL, mC 113 C
    -> AL10047861 5 fold aL 54 C
    -> AL00052441 7 homologous aL 52
    -> AL00050799 7 homologous aL 63
    -> AL10057468 15 fragment iC 25 P, C
    -> AL00051306 4 homologous 71 I
    -> AL00063763 3 homologous 56 C
    -> AL00050021 13 homologous aL 82 C
    -> AL10069117 5 homologous mC 123
    -> AL10050875 6 homologous aL 42 C
    -> AL00089800 4 homologous aL, mC 116
    -> AL00051906 5 homologous aL 95
    -> AL00051904 5 homologous aL 81 I, P
    -> AL10057491 8 fragment 17
    -> AL00051971 9 homologous aL 80 I

    Table Description

    SisyAlId SISYPHUS alignment id
    Mem. Number of members in the multiple alignment
    Caveats Structure may cause a problem because of:
    iC … insertion codes in the PDB
    mC … multi chain domains
    aL … alternate locations in the PDB
    Category SISYPHUS category
    Class Difficulty class, combination of R,I,P and C
    Eqr Number of reference residues